R Data Analysis Guide

R Data Analysis and Visualization Guide | ggplot2 Plotting, Data Wrangling and Econometrics

How to analyze and visualize research data using R and RStudio? This guide covers data wrangling (dplyr/tidyverse), publication-grade plotting with ggplot2, OLS, and panel data models.

Data analysis guidePython academic plotting guide
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Direct answer for this topic

R is the premier open-source tool for quantitative analysis, using the Tidyverse framework to maximize wrangling efficiency.

  • ggplot2 relies on aesthetic mappings. Academic plots generally use theme_bw() or theme_classic() to strip non-essential backgrounds.
  • For econometric analysis, the plm package provides robust functions to estimate fixed and random panel data models.
  • Always save figures using ggsave() as PDFs to maintain infinite vector scaling. Use TIFF only if bitmapped files are explicitly requested.
  • Efficient data wrangling, merging, and cleaning using dplyr and Tidyverse
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Review record
2026-06-22
AcademicIdeas Editorial Review

Reviewed against the platform’s public data-analysis, Python plotting, and quantitative-method pages, and cross-referenced with the official R Project manuals (CRAN manuals) and Tidyverse/ggplot2 documentations to verify R commands, dplyr pipelines, ggplot2 aesthetics, and plm panel data model syntax.

Source basis
R Project CRAN Manuals (Official)
cran.r-project.org
Used to verify base R syntax, core regression functions lm() / glm(), and official package installation standards.
ggplot2 Tidyverse Reference Center (Official)
ggplot2.tidyverse.org
Used to verify theme(), geom_line(), and plot layer options for standard scientific figures.
Posit (RStudio) Support Hub (Official)
support.posit.co
Used to verify RStudio workspace optimization, library setups, and R Markdown rendering guidelines.
Thesis data analysis guide
acaids.com
Used to support descriptive statistics, output reading, and result interpretation.
Python academic plotting guide
acaids.com
Used to support cross-tool plotting standards and export consistency.
Suggested citation
AcademicIdeas Editorial Team. (2026). R Data Analysis and Visualization Guide: ggplot2 and dplyr Best Practices. AcademicIdeas Knowledge Base.
Topic graph

Related workflows and reference pages

Read the SCI polishing guidePrepare reviewer responsesUse the cover letter templateData analysis guidePython academic plotting guideStata empirical analysis guide

What this page helps you do first

  • Efficient data wrangling, merging, and cleaning using dplyr and Tidyverse
  • Academic chart beautification using ggplot2 with Times New Roman settings
  • Code templates for panel data estimation (fixed and random effects) via plm package

Why choose R for academic papers and econometrics

R is an open-source programming language built specifically for statistical computing and graphics. Its advantages over Stata and SPSS include: powerful visualization ecosystems (led by ggplot2); rapid package updates on CRAN; and strong scraping/text-mining pipelines.

For papers requiring advanced machine learning models, complex non-linear relations, or high-fidelity custom plots, R is an essential asset.

Data wrangling with dplyr and Tidyverse

  • [Install and load core packages] install.packages("tidyverse"); library(tidyverse)
  • [Import csv data] df <- read_csv("data.csv")
  • [Select columns and rename] df_select <- df %>% select(id, year, Y = wage, X1 = educ)
  • [Filter rows and arrange] df_filter <- df_select %>% filter(year >= 2018) %>% arrange(desc(Y))
  • [Create new variables] df_mutate <- df_filter %>% mutate(log_Y = log(Y), X1_sq = X1^2)

ggplot2 academic plotting and font customization

  • [Basic line and scatter plot] ggplot(df, aes(x = X1, y = Y)) + geom_point() + theme_bw()
  • [Apply global Times New Roman theme] theme_academic <- theme_classic() + theme(text = element_text(family = "Times New Roman", size = 10))
  • [Arrange subplots via facet] p + facet_wrap(~ category, scales = "free_y")

OLS and panel data regressions with plm

  • [OLS regression] model_ols <- lm(Y ~ X1 + X2 + X3, data = df); summary(model_ols)
  • [Robust standard errors] coeftest(model_ols, vcov = vcovHC(model_ols, type = "HC1"))
  • [Panel data setup] pdf <- pdata.frame(df, index = c("id", "year"))
  • [Fixed effects model (FE)] model_fe <- plm(Y ~ X1 + X2, data = pdf, model = "within")
  • [Hausman test] phtest(model_fe, model_re)

High-quality figure export guidelines

  • [Vector PDF export] ggsave("figure_1.pdf", plot = p, width = 6, height = 4.5, units = "in", device = "pdf")
  • [High-resolution TIFF export] ggsave("figure_1.tiff", plot = p, dpi = 300, width = 15, height = 11, units = "cm")
  • Make sure to match width and height parameter units with the target journal layout constraints to avoid scaling artifacts.

Frequently asked questions

How do I resolve font errors in ggplot2?
Install the extrafont package in R, run font_import() to register system fonts, and specify family = "Times New Roman" inside theme() configurations.
Data analysis guidePython academic plotting guideStata empirical analysis guide